Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936391.1_cds_XP_016481999.1_73279
CDS Infomation

[gene=LOC107802931] [db_xref=GeneID:107802931] [protein=protein FAR-RED ELONGATED HYPOCOTYL 3-like isoform X3] [protein_id=XP_016481999.1] [location=join(125399..127579,127657..127713,127846..127914,127994..128062,128154..128222,128298..128345,129156..129212)] [gbkey=CDS]
Sequence

ATGGATATAGATCTTCGGCTGCCTTCTCGAGATCATGATAAGGAAGAAGAAGAAGAACAA
AATGGAATTATAAATATGCTTGACAATGAAGAAAAAATGCACAGTGATGATGGAATGCAT
GGGATGCTGGTTGTTGTTGAAGAGAAGATGCATGCAGAAGATGGAGGCGATATGAACACC
CCCGTAGAAAATATCATAGAGTTTAAGGAGGATGTAAACCTTGAACCGCTGGCTGGCATG
GAATTTGAGTCCCATGGTGAAGCTTATGCCTTTTATCAAGAATATGCTCGGTCAATGGGA
TTCAATACAGCCATACAAAACAGCCGTCGCTCAAAGACGTCAAGGGAATTCATTGATGCA
AAATTTGCATGTTCTAGGTATGGAACGAAACGGGAATATGAGAAGTCTGCAAATCGACCA
CGTAGTAGACAAGGGAACAAGCAGGATCCAGAAAATGCTACTGGTCGGCGAGCATGTGCA
AAGACAGATTGCAAAGCAAGTATGCATGTGAAAAGAAGACCCGATGGGAAATGGATCATT
CATAGATTCGAGAAAGAACATAATCATGAACTTTTACCTGCCCAAGCTGTCAGTGAACAA
ACAAGAAGGATGTATGCCGCTATGGCAAGACAGTTTGCTGAATACAAAAATGTAGTTGGT
CTGAAAAGTGACTCTAAAGGTCCATTTGAGAAAGGTCGAAATTCAGCAATGGAAGGGGGA
GACATAAACGTTTTGCTGGAGTTTTTCATTCAGATGCAAAGTCTTAATTCCAACTTCTTT
TATGCTGCTGATGTGGGTGAAGATCAACGTGTGAAGAACTTATTCTGGGTTGATGCCAAA
GCCAGGCATGACTATGCAAATTTCAGTGATGTTGTGTCTTTTGATACTACGTACATCAGA
AACAAGTACAAAATGCCCCTGGCTCTTTTTGTTGGGGTCAATCAGCATTATCAGTTCATG
CTACTTGGATGCGCTTTGGTCTCTGATGAGAGTGCAACAACATTTTCTTGGGTAATGCGG
ACATGGTTGAAGGCAATGGGTGGTCAAGCTCCCAAGACAGTGATCACAGATCATGACCAG
GTGTTGAAGTCAGTCATTTCAGAGGCTTTGCCATCATCCCTCCATTATTTCTGTATGTGG
CATATCCTGGGAAAGGTGTCCGAAACACTGAATCATGTCATTAAACAGAACGAAAAGTTT
ATGGCAAAGTTTGAGAAATGTATTTACAGGTCATCGACAGATGAGGAGTTTGAAAAGAGG
TGGAGAAAACTAGTTGATAGATTTGATCTCAGAGAAGCTGAATTGATTCATTTGCTCTAT
GAAGATCGTGTGAAATGGATCCCTATGTTTATGAGAGATGCATTTTTAGCGGGAATGTCA
ACGGTTCAACGATCAGAGAGTGTGAACTCTTTCTTTGACAAATATGTACATAAGAAAACC
ACTGTCCCGGAGTTTGTAAAGCAATATGAAACAATATTACAAGATAGGTATGAGGAGGAG
GCAAAAGCAGATTCTGATACATGGAACAAACAACCTGCTTTGAAATCTCCATCACCATTC
GAGAAGCATGTGGCAGGGCTTTATACACATGCTGTATTTAAGAAATTTCAGGCTGAGGTT
TTGGGTGCAGTTGCTTGTATTCCTAAAAGAGAGCAGCAAGATGAGACAACCATAACATTT
GGAGTTAAAGATTATGAGAAGGATCAAGATTTCATTGTTACATTGAATGAAGTGAAGTCA
GAAATATCTTGTGTATGTCATTTGTTTGAATTTAAAGGCTACCTTTGTAGACATGCATTG
ATAGTTCTCCAAATATGTGGTGTTTCCTCTATCCCATTACACTATATATTGAAGCGATGG
ACAAAAGATGCCAAGAGCAAGTACTCTATGACAGATGGATCTGAAGATGTGCAGTCAAGA
GTCCAGAGATATAATGAGCTATGCTATAGGGCGATGAAATTGAGTGAAGAAGGGTCATTA
TCCCAAGAGAGCTATAGTTTTGCTCTTCGTGCACTTGATGATGCTTTTGGGAGTTGCGTG
ACCTTTAATAACTCAAATAAGAATATTTTAGAAGCTGGCACATCATCAGCTCCTGGTCTT
CTCTGTGTTGAAGACGATAACCAAAGTAGGAGTATGAGCAAGACAAACAAGAAGAAGAAT
AGTTTTACTAAGAAACGGAAGGTGAACTCGGAGCCAGATGTTATGGCTGTTGGGGCAGCA
GACAGCTTGCAACAAATGGACAAATTGAACTCCAGACCTGTGACTCTTGATGGTTATTTT
GGACCACAACAAAGTGTTCAAGGAATGGTACAGTTGAACTTAATGGCACCAACTCGGGAT
AACTACTATGGAAACCAACAGACTATTCAGGGCCTTGGACAGTTGAATTCTATAGCTCCT
ACACATGATGGCTATTATGGTGCTCAGCCAACAATGCATGGGCTGGGGCAAATGGACTTT
TTTCGCGCTCCAAGTTTCCCATATGGCATTCGGGACGAACCCAATGTAAGATCTGCTCAA
TTGCACGACGAAGCATCCAGACATCCTTGA

Peptide Sequence

PEP ID

XP_016481999.1
PEP Infomation

PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like isoform X3 [Nicotiana tabacum]
Sequence

MDIDLRLPSRDHDKEEEEEQNGIINMLDNEEKMHSDDGMHGMLVVVEEKMHAEDGGDMNT
PVENIIEFKEDVNLEPLAGMEFESHGEAYAFYQEYARSMGFNTAIQNSRRSKTSREFIDA
KFACSRYGTKREYEKSANRPRSRQGNKQDPENATGRRACAKTDCKASMHVKRRPDGKWII
HRFEKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKNVVGLKSDSKGPFEKGRNSAMEGG
DINVLLEFFIQMQSLNSNFFYAADVGEDQRVKNLFWVDAKARHDYANFSDVVSFDTTYIR
NKYKMPLALFVGVNQHYQFMLLGCALVSDESATTFSWVMRTWLKAMGGQAPKTVITDHDQ
VLKSVISEALPSSLHYFCMWHILGKVSETLNHVIKQNEKFMAKFEKCIYRSSTDEEFEKR
WRKLVDRFDLREAELIHLLYEDRVKWIPMFMRDAFLAGMSTVQRSESVNSFFDKYVHKKT
TVPEFVKQYETILQDRYEEEAKADSDTWNKQPALKSPSPFEKHVAGLYTHAVFKKFQAEV
LGAVACIPKREQQDETTITFGVKDYEKDQDFIVTLNEVKSEISCVCHLFEFKGYLCRHAL
IVLQICGVSSIPLHYILKRWTKDAKSKYSMTDGSEDVQSRVQRYNELCYRAMKLSEEGSL
SQESYSFALRALDDAFGSCVTFNNSNKNILEAGTSSAPGLLCVEDDNQSRSMSKTNKKKN
SFTKKRKVNSEPDVMAVGAADSLQQMDKLNSRPVTLDGYFGPQQSVQGMVQLNLMAPTRD
NYYGNQQTIQGLGQLNSIAPTHDGYYGAQPTMHGLGQMDFFRAPSFPYGIRDEPNVRSAQ
LHDEASRHP

Transcript Sequence

Gene sequence data has not been registered.